Mudd in Your Eye No 50

Page 10 · Lehigh University Facullty News During the previous academic year, Dr. Im conducted the following professional endeavors: GRANTS: Wonpil Im NIH R01 GM138472 (PI: 2020-2024)CHARMM-GUI Development of Biomolecular Modeling and Simulation Community NIH R01 GM087544 (Co-Investigator: 2020-2024; PI: Howard Hang)Studies of Protein LipidationNSF DBI-2011234 (PI: 2020-2024)CIBR: Computational resources for realistic simulations and analysis of protein in natural biomembranes NIH R01 GM103899 (Co-Investigator: 2019-2023; PI: Vera Moiseenkova-Bell)Structural Insights into TRPV Channel GatingNSF OAC-1931343 (PI: 2019-2023)Collaborative Research: Frameworks: Cyberloop for Accelerated Bionanomaterials Design INVITED TALKS: 1. Institute for Quantitative and Computational Biosciences, UCLA, LA, USA 2. Center for Complex Biological Systems University of California, Irvine, USA 3. Glyco-lipidologue Symposium, RIKEN, Tokyo, JAPAN 4. PharmCADD CO., LTD., Busan, KOREA 5. Department of Chemistry, Sookmyung Women's University, Seoul, KOREA 6. Arontier, Inc, Seoul, KOREA 7. School of Computational Sciences, Korean Institute for Advance Study, Seoul, KOREA 8. Center for Computational and Integrative Biology, Rutgers-Camden, Camden, USA 9. Center for Biophysics & Computational Biology, Temple University, Philadelphia, USA 10. Molecular Dynamics Software Interoperability, MolSSI workshop, Brooklyn, USA 11. National Renewable Energy Laboratory, Golden, USA 12. Cyberloop for Bionanomaterials Design - Kick-off Meeting, University of Colorado, Boulder, USA 13. Institute for Biomedical Informatics, University of Kentucky, Lexington, USA 14. CHARMM-GUI KIAS School, Seoul, KOREA PUBLICATIIONS: Cao, Y.; Park, S.J. and Im, W. "A Systematic Analysis of Protein-Carbohydrate Interactions in the PDB" Glycobiology, 2020, doi.org/10.1093/glycob/cwaa062 Shin, K.; Kent, J.E.; Singh, C.; Fujimoto, L.M.; Tian, Y.; Im, W. and Marassi, F.M. "Calcium and Hydroxyapatite Binding Site of Human Vitronectin Provide New Insights for Abnormal Deposit Formation" Proc. Natl. Acad. Sci. USA, 2020, 117, 31, 18504-18510 Ryzhov, P.;Tian, Y.; Yao, Y.; Bobkov, A.A.; Im, W. and Marassi, F.M. "Conformational States of Bcl-xL Regulate Antiapoptotic Activity" Biophys. J. 2020, in press Lee, J.; Hitzenberger, M.; Rieger, M.; Kern, N.R.; Zacharias, M. and Im, W. "CHARMM-GUI Supports the Amber Force Fields" J. Chem. Phys. 2020, 153, 3, 035103. Woo, H.; Park, S-J.; Choi, Y.K.; Park, T.; Tanveer, M.; Cao, Y.; Kern, N.R.; Lee, J.; Yeom, M.S.; Croll, T.I.; Seok, C. and Im, W. "Developing a Fully-glycosylated Full-length SARS-CoV-2 Spike Protein Model in a Viral Membrane" J. Phys. Chem. B. 2020, 124, 33, 7128–7137 Gao, Y.; Lee, J.; Widmalm, G. and Im, W. "Modeling and Simulation of Bacterial Outer Membranes with Lipopolysaccharides and Enterobacterial Common Antigen" J. Phys. Chem. B. in press , 2020, 124, 28, 5948–5956.

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